The fastest Python implementation of the ForceAtlas2 graph layout algorithm, with Cython optimization for 10-100x speedup. Supports NetworkX, igraph, and raw adjacency matrices. ForceAtlas2 is a force ...
This project provides a comprehensive pipeline to process 3D RNA structures from the Protein Data Bank (PDB), as cataloged by RNA3DB, to generate a curated dataset of RNA secondary structures in BPSEQ ...
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