scienceopen.com

Genetic and Molecular Relationships Between Chronic Obstructive Pulmonary Disease and Abdominal Aortic Aneurysm: Insights from a Multi-Omics Approach

We used bidirectional two-sample Mendelian randomization (MR) to investigate the causal relationship between COPD and AAA. Expression quantitative trait loci (eQTL) analysis was performed with GTEx V8 ...
IEEE

Identification of Hub Genes and Enriched Pathways in Lung Cancer using Single-Cell RNA Sequencing

Abstract: This research analyzes RNA sequencing data collected from individual cell data from the GSE127471 and GSE245170 datasets to identify potential biomarkers and treatment targets in non-small ...
scienceopen.com

Discovering cell type and tissue architecture with imaging-based spatial transcriptomics

Spatially resolved omics analysis of tissue sample promises to transform biomedical research and diagnostic. In this talk, I will introduce a spatial clustering algorithm called BANKSY. BANKSY is a ...
GitHub

Starlitnightly/single_cell_tutorial

!!! note 楔子 从事单细胞分析也有一段时间了，国内大部分中文教程都是使用R语言进行分析，使用Python的还比较少 ...
Frontiers

Deciphering tissue heterogeneity from spatially resolved transcriptomics by the autoencoder-assisted graph convolutional neural network

Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China Though these methods have provided useful information on the usage of ...
Frontiers

scMODD: A model-driven algorithm for doublet identification in single-cell RNA-sequencing data

The input data is preprocessed with the Scanpy package in Python. Starting from the raw gene-cell count matrix, library size normalization is performed to scale the total counts of each cell to be ...